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| BGM Battle Music Changes to "Battlefield" | Insert Rockman EXE 4.5 Real Operation in GBA Slot. |
| BGM Battle Music Changes to "Cyber Battle" | Insert Rockman EXE 4 Tournament Red Sun or Blue Moon/Megaman Battle Network 4 (Any Version) in GBA Slot. |
| BGM Battle Music Changes to "Operation!" | Insert Battle Network Rockman EXE/Megaman Battle Network in GBA Slot. |
| BGM Battle Music Changes to "Operation!" | Insert Battle Network Rockman EXE 2/Megaman Battle Network 2 in GBA Slot. |
| BGM Battle Music Changes to "Shooting Enemy" | Insert Battle Network Rockman EXE 3/Megaman Battle Network 3 (Any Version) in GBA Slot. |
| Dad's Office. Scientist appears and is a Sub Chip Merchant that gives Full Energy, Unlocker, & Lock Enemy for 1/2 Price | Insert Battle Network Rockman EXE 2/Megaman Battle Network 2 in GBA Slot. |
| End Area 1 NC Program Merchant that gives Rapid+1 (Yellow) = 1500z, Charge+1 (Pink) = 1500z, & HP+500 (Yellow) = 12000z | Insert Battle Network Rockman EXE 3/Megaman Battle Network 3 (Any Version) in GBA Slot. |
| EXE 1-5 music change | Insert Rockman.exe Battle Network 1-5 into the W-Gate. The music will change to that of the game you inserted. |
| Folder Import option appears for Saved Game on a EXE 5 DS Save to whichever folder is equipped in the GBA Save (Third Non-Customizable Folder) | Insert Rockman EXE 5 Team of Blues or Team of Colonel/Megaman Battle Network 5 (Any Version) in GBA Slot. |
| Forte (Bass) Mark Icon for any EXE 5 Save Prompts you before you start your New or Saved Game on EXE 5 DS if you want to use Forte Cross Rockman | Insert Rockman EXE 5 Team of Blues or Team of Colonel/Megaman Battle Network 5 (Any Version) in GBA Slot. |
| Forte Cross Rockman Effect | Insert a Rockman.exe Battle Network Team Colonel or Team Blues cart with the Forte Mark into the W-Gate |
| Gold Program appears at Netto's homepage | Insert Rockman.exe Battle Network 4.5: Real Operation into the W-Gate |
| Golden Program appears at Netto's HP at the end infront of the portal and gives a Mysterious Mail to Rockman, Accomplishing this mission gives 50000z | Insert Rockman EXE 4.5 Real Operation in GBA Slot. |
| Inserting prompts use of Sol Cross Rockman before starting any game in EXE 5 DS. | Insert Shin Bokura no Taiyou ~ Gyakushuu no Sabata/Boktai 3 in GBA Slot. |
| Liberate Mission Blues (Protoman) / Colonel Dominant Chip Power Up | Insert Battle Network Rockman EXE/Megaman Battle Network in GBA Slot. |
| Liberate Mission Gyro Man / Shadow Man Dominant Chip Power Up | Insert Battle Network Rockman EXE 3/Megaman Battle Network 3 (Any Version) in GBA Slot. |
| Liberate Mission Magnet Man / Knight Man Dominant Chip Power Up | Insert Battle Network Rockman EXE 2/Megaman Battle Network 2 in GBA Slot. |
| Liberate Mission Medi / Toad Man Dominant Chip Power Up | Insert Rockman EXE 5 Team of Blues or Team of Colonel/Megaman Battle Network 5 (Any Version) in GBA Slot. |
| Liberate Mission Napalm Man / Tomahawk Man Dominant Chip Power Up | Insert Rockman EXE 4 Tournament Red Sun or Blue Moon/Megaman Battle Network 4 (Any Version) in GBA Slot. |
| Liberate Mission Search Man / Number Man Dominant Chip Power Up | Insert Rockman EXE 4.5 Real Operation in GBA Slot. |
| Program Advance combinations and what chips to use are discussed in Random Bulletin Boards | Insert Rockman EXE 4 Tournament Red Sun or Blue Moon/Megaman Battle Network 4 (Any Version) in GBA Slot. |
| Sol Cross Rockman Effect | Insert a Boktai 3 game pack into the W-Gate |
| Ura Internet Area 4 Black Navi appears and asks to give an extra folder (Non-Customizable) "War Folder" | Insert Battle Network Rockman EXE/Megaman Battle Network in GBA Slot. |
| War Folder from Heelnavi in Uranet 4 | Insert Rockman.exe Battle Network 1 into the W-Gate |
